Valor taxonômico de caracteres foliares em Dahlstedtia Malme: Leguminosae, Papilionoideae, Millettieae

Dahlstedtia Malme (Leguminosae) is a neotropical genus, native to the Brazilian Atlantic Forest, and comprises two species, D. pinnata (Benth.) Malme and D. pentaphylla (Taub.) Burk., although it has been considered a monotypic genus by some authors. Leaf anatomy was compared to verify the presence of anatomical characters to help delimit species. Foliar primordium, leaflet, petiolule, petiole and pulvinus were collected from cultivated plants (Campinas, SP, Brazil) and from natural populations (Picinguaba, Ubatuba and Caraguatatuba, SP, Brazil - D. pinnata; Antonina, PR, Brazil - D. pentaphylla). Studies on leaflet surface assessment (Scanning Electron Microscopy), as well as histology and venation analyses were carried out of dehydrated, fresh and fixed material from two species. Leaflet material was macerated for stomatal counts. Histological sections, obtained by free-hand cut or microtome, were stained with Toluidine Blue, Safranin/Alcian Blue, Ferric Chloride, Acid Phloroglucin. Secretory cavities are present in the lamina, petiolule, petiole, pulvinus and leaf primordium in D. pentaphylla, but not in D. pinnata, and can be considered an important character for species diagnosis. Other leaf characters were uninformative in delimiting Dahlstedtia species. There is cambial activity in the petiolule, petiole and pulvinus. This study, associated with other available data, supports the recognition of two species in Dahlstedtia.Dahlstedtia Malme (Leguminosae) é um gênero neotropical, com duas espécies reconhecidas, D. pinnata (Benth.) Malme e D. pentaphylla (Taub.) Burk., embora tenha sido considerado monotípico por alguns autores. Seus representantes ocorrem na Floresta Atlântica, nos Estados do Sul e Sudeste do Brasil. Neste trabalho, realizamos um estudo comparativo da anatomia foliar, para verificar a presença de caracteres que possam auxiliar a identificação das espécies. Primórdio foliar, lâmina foliar, peciólulo, pecíolo e pulvino foram coletados de plantas cultivadas em Campinas, SP, Brasil e de populações naturais encontradas em Picinguaba, Ubatuba e Caraguatatuba, SP, Brasil (D. pinnata) e em Antonina, PR, Brasil (D. pentaphylla). Análises da superfície (Microscopia Eletrônica de Varredura), da venação foliolar e histológicas foram realizadas em material herborizado, fresco e fixado. A contagem de estômatos foi realizada após maceração do limbo. Lâminas semi-permanentes e permanentes foram confeccionadas com cortes obtidos a mão livre e em micrótomo rotativo, respectivamente, corados com Azul de Toluidina, Safranina/Azul de Alcian, Cloreto Férrico e Floroglucina Acidificada. Cavidades secretoras estão presentes na lâmina foliar, no peciólulo, no pecíolo, no pulvino e no primórdio foliar de D. pentaphylla, mas não foram encontradas em D. pinnata, constituindo um caráter diagnóstico para as espécies. Os outros caracteres foliares não foram informativos. Uma característica anatômica que merece ser ressaltada é a presença de atividade cambial no peciólulo, pecíolo e pulvino. Os dados obtidos deste estudo, associados a outros disponíveis na literatura, confirmam o reconhecimento de duas espécies no gênero Dahlstedtia.395403Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES

Vegetative axis anatomy of Dahlstedtia pinnata (Benth.) Malme and D. pentaphylla (Taub.) Burk. (Leguminosae, Papilionoideae)

Dahlstedtia Malme is a Neotropical genus, native to the Brazilian Atlantic forest, with two species. It is considered monotypic by many authors. The comparative anatomy of the vegetative axis was studied in order to verify the presence of anatomical characters that can help in the species delimitation. In spite of the anatomical similarity between species, some distinctive characters were found, like the presence of crystalliferous idioblasts in the secondary phloem of D. pentaphylla stem, a smaller number of primary stem fibre layers in D. pinnata, and the region of the secretory cavities origin in the shoot apex. As some differences were quantitative, they must be carefully used in species taxonomic delimitation.As plantas do gênero Dahlstedtia ocorrem exclusivamente no Brasil, em áreas de Mata Atlântica. O gênero é constituído por duas espécies, D. pinnata e D. pentaphylla, embora muitos autores o considerem monotípico. O objetivo deste trabalho é estudar comparativamente a anatomia do eixo vegetativo e verificar a presença de caracteres anatômicos importantes para subsidiar a delimitação destas espécies. Os caracteres anatômicos encontrados no eixo vegetativo que poderiam diferenciar as duas espécies são, em sua maioria, quantitativos, devendo ser utilizados com cautela para a identificação dos taxa, pois nem sempre são constantes num grupo. Entretanto, a presença de idioblastos cristalíferos no floema do caule em estrutura secundária de D. pentaphylla, um menor número de camadas de fibras no caule em estrutura primária em D. pinnata e a origem das cavidades secretoras em níveis diferentes na gema caulinar podem se constituir em caracteres distintivos para as duas espécies.0111Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES

Cross-disease Meta-analysis of Genome-wide Association Studies for Systemic Sclerosis and Rheumatoid Arthritis Reveals IRF4 as a New Common Susceptibility Locus

Objectives: Systemic sclerosis (SSc) and rheumatoid arthritis (RA) are autoimmune diseases that share clinical and immunological characteristics. To date, several shared SSc- RA loci have been identified independently. In this study, we aimed to systematically search for new common SSc-RA loci through an inter-disease meta-GWAS strategy. Methods: We performed a meta-analysis combining GWAS datasets of SSc and RA using a strategy that allowed identification of loci with both same-direction and opposingdirection allelic effects. The top single-nucleotide polymorphisms (SNPs) were followed-up in independent SSc and RA case-control cohorts. This allowed us to increase the sample size to a total of 8,830 SSc patients, 16,870 RA patients and 43,393 controls. Results: The cross-disease meta-analysis of the GWAS datasets identified several loci with nominal association signals (P-value < 5 x 10-6), which also showed evidence of association in the disease-specific GWAS scan. These loci included several genomic regions not previously reported as shared loci, besides risk factors associated with both diseases in previous studies. The follow-up of the putatively new SSc-RA loci identified IRF4 as a shared risk factor for these two diseases (Pcombined = 3.29 x 10-12). In addition, the analysis of the biological relevance of the known SSc-RA shared loci pointed to the type I interferon and the interleukin 12 signaling pathways as the main common etiopathogenic factors. Conclusions: Our study has identified a novel shared locus, IRF4, for SSc and RA and highlighted the usefulness of cross-disease GWAS meta-analysis in the identification of common risk loci

Complement component C4 structural variation and quantitative traits contribute to sex-biased vulnerability in systemic sclerosis

Altres ajuts: Fondo Europeo de Desarrollo Regional (FEDER), "A way of making Europe".Copy number (CN) polymorphisms of complement C4 play distinct roles in many conditions, including immune-mediated diseases. We investigated the association of C4 CN with systemic sclerosis (SSc) risk. Imputed total C4, C4A, C4B, and HERV-K CN were analyzed in 26,633 individuals and validated in an independent cohort. Our results showed that higher C4 CN confers protection to SSc, and deviations from CN parity of C4A and C4B augmented risk. The protection contributed per copy of C4A and C4B differed by sex. Stronger protection was afforded by C4A in men and by C4B in women. C4 CN correlated well with its gene expression and serum protein levels, and less C4 was detected for both in SSc patients. Conditioned analysis suggests that C4 genetics strongly contributes to the SSc association within the major histocompatibility complex locus and highlights classical alleles and amino acid variants of HLA-DRB1 and HLA-DPB1 as C4-independent signals

Report from Working Group 3: Beyond the standard model physics at the HL-LHC and HE-LHC

This is the third out of five chapters of the final report [1] of the Workshop on Physics at HL-LHC, and perspectives on HE-LHC [2]. It is devoted to the study of the potential, in the search for Beyond the Standard Model (BSM) physics, of the High Luminosity (HL) phase of the LHC, defined as $3$ ab$^{-1}$ of data taken at a centre-of-mass energy of 14 TeV, and of a possible future upgrade, the High Energy (HE) LHC, defined as $15$ ab$^{-1}$ of data at a centre-of-mass energy of 27 TeV. We consider a large variety of new physics models, both in a simplified model fashion and in a more model-dependent one. A long list of contributions from the theory and experimental (ATLAS, CMS, LHCb) communities have been collected and merged together to give a complete, wide, and consistent view of future prospects for BSM physics at the considered colliders. On top of the usual standard candles, such as supersymmetric simplified models and resonances, considered for the evaluation of future collider potentials, this report contains results on dark matter and dark sectors, long lived particles, leptoquarks, sterile neutrinos, axion-like particles, heavy scalars, vector-like quarks, and more. Particular attention is placed, especially in the study of the HL-LHC prospects, to the detector upgrades, the assessment of the future systematic uncertainties, and new experimental techniques. The general conclusion is that the HL-LHC, on top of allowing to extend the present LHC mass and coupling reach by $20-50\%$ on most new physics scenarios, will also be able to constrain, and potentially discover, new physics that is presently unconstrained. Moreover, compared to the HL-LHC, the reach in most observables will, generally more than double at the HE-LHC, which may represent a good candidate future facility for a final test of TeV-scale new physics

Search for dark matter produced in association with bottom or top quarks in √s = 13 TeV pp collisions with the ATLAS detector

A search for weakly interacting massive particle dark matter produced in association with bottom or top quarks is presented. Final states containing third-generation quarks and miss- ing transverse momentum are considered. The analysis uses 36.1 fb−1 of proton–proton collision data recorded by the ATLAS experiment at √s = 13 TeV in 2015 and 2016. No significant excess of events above the estimated backgrounds is observed. The results are in- terpreted in the framework of simplified models of spin-0 dark-matter mediators. For colour- neutral spin-0 mediators produced in association with top quarks and decaying into a pair of dark-matter particles, mediator masses below 50 GeV are excluded assuming a dark-matter candidate mass of 1 GeV and unitary couplings. For scalar and pseudoscalar mediators produced in association with bottom quarks, the search sets limits on the production cross- section of 300 times the predicted rate for mediators with masses between 10 and 50 GeV and assuming a dark-matter mass of 1 GeV and unitary coupling. Constraints on colour- charged scalar simplified models are also presented. Assuming a dark-matter particle mass of 35 GeV, mediator particles with mass below 1.1 TeV are excluded for couplings yielding a dark-matter relic density consistent with measurements

Robust estimation of bacterial cell count from optical density

Optical density (OD) is widely used to estimate the density of cells in liquid culture, but cannot be compared between instruments without a standardized calibration protocol and is challenging to relate to actual cell count. We address this with an interlaboratory study comparing three simple, low-cost, and highly accessible OD calibration protocols across 244 laboratories, applied to eight strains of constitutive GFP-expressing E. coli. Based on our results, we recommend calibrating OD to estimated cell count using serial dilution of silica microspheres, which produces highly precise calibration (95.5% of residuals &lt;1.2-fold), is easily assessed for quality control, also assesses instrument effective linear range, and can be combined with fluorescence calibration to obtain units of Molecules of Equivalent Fluorescein (MEFL) per cell, allowing direct comparison and data fusion with flow cytometry measurements: in our study, fluorescence per cell measurements showed only a 1.07-fold mean difference between plate reader and flow cytometry data